sci-libs/Mutationpp: new package, add 1.0.5

Signed-off-by: Alessandro Barbieri <lssndrbarbieri@gmail.com>

sci-libs/Mutationpp/Manifest

@@ -0,0 +1 @@
+DIST Mutationpp-1.0.5.tar.gz 4038229 BLAKE2B 7b7d52d1ef851d8f076ae9301e43fe6fbf51d38748c5da8ff960b3eba42e01df3156dea5b363fcdaa150ca3db3700dee4246869fe7b743ec64ad446bdd27bcef SHA512 9c1d89376b55b83689ec05e1ed43f4ad70d15c7ecc6b7de4b4401dac5abc1db8ae4b7f6cbe3db038f53776690be6fd611f6b7a07ae38b9ce0deae24008b87ffa

sci-libs/Mutationpp/Mutationpp-1.0.5.ebuild

@@ -0,0 +1,88 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DISTUTILS_OPTIONAL=1
+DISTUTILS_USE_PEP517=setuptools
+FORTRAN_NEEDED="fortran"
+PYTHON_COMPAT=( python3_{8..9} )
+
+inherit distutils-r1 cmake fortran-2
+
+DESCRIPTION="MUlticomponent Thermodynamic And Transport library for IONized gases"
+HOMEPAGE="https://github.com/mutationpp/Mutationpp"
+SRC_URI="https://github.com/mutationpp/${PN}/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz"
+
+KEYWORDS="~amd64"
+LICENSE="LGPL-3"
+SLOT="0"
+IUSE="doc fortran python test"
+
+RDEPEND="
+	dev-cpp/eigen
+	python? (
+		${PYTHON_DEPS}
+		dev-python/numpy[${PYTHON_USEDEP}]
+	)
+"
+DEPEND="
+	${RDEPEND}
+	test? ( dev-cpp/catch:0 )
+	python? (
+		dev-python/pybind11[${PYTHON_USEDEP}]
+		>=dev-python/scikit-build-0.11.1[${PYTHON_USEDEP}]
+		dev-python/wheel[${PYTHON_USEDEP}]
+	)
+"
+BDEPEND="
+	dev-util/ninja
+	dev-util/cmake
+	doc? ( app-doc/doxygen )
+"
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+DOCS=( {README,CHANGELOG}.md docs )
+PATCHES=( "${FILESDIR}/${P}-system-libs.patch" )
+
+distutils_enable_tests pytest
+
+src_prepare() {
+	rm -r thirdparty || die
+	cmake_src_prepare
+	use python && python_prepare_all
+}
+
+src_configure() {
+	local mycmakeargs=(
+		-DENABLE_COVERAGE=OFF
+
+		-DBUILD_DOCUMENTATION=$(usex doc)
+		-DBUILD_FORTRAN_WRAPPER=$(usex fortran)
+		-DBUILD_PYTHON_WRAPPER=$(usex python)
+		-DENABLE_TESTING=$(usex test)
+	)
+	cmake_src_configure
+}
+
+src_compile() {
+	cmake_src_compile
+	use python && python_foreach_impl distutils-r1_python_compile
+}
+
+src_install() {
+	cmake_src_install
+	use python && python_foreach_impl distutils-r1_python_install
+	insinto "/usr/share/${PN}"
+	doins -r data
+	echo MPP_DIRECTORY="/usr/share/${PN}" > "99${PN}"
+	echo MPP_DATA_DIRECTORY="/usr/share/${PN}/data" >> "99${PN}"
+	doenvd "99${PN}"
+}
+
+src_test() {
+	export MPP_DIRECTORY="."
+	export MPP_DATA_DIRECTORY="${MPP_DATA_DIRECTORY}/data"
+	cmake_src_test
+	use python && python_foreach_impl distutils-r1_python_test
+}

sci-libs/Mutationpp/files/Mutationpp-1.0.5-system-libs.patch

@@ -0,0 +1,31 @@
+--- a/cmake/modules/FindCatch2.cmake
++++ b/cmake/modules/FindCatch2.cmake
+@@ -33,7 +33,6 @@
+     "/usr/include"
+     "$ENV{CPLUS_INCLUDE_PATH}"
+     "$ENV{CPATH}"
+-    "${CMAKE_SOURCE_DIR}/thirdparty/catch"
+     )
+ 
+ # First try to use the standard find_package that should be able to find the
+--- a/cmake/modules/FindEigen3.cmake
++++ b/cmake/modules/FindEigen3.cmake
+@@ -34,7 +34,6 @@
+     "/usr/include"
+     "$ENV{CPLUS_INCLUDE_PATH}"
+     "$ENV{CPATH}"
+-    "${CMAKE_SOURCE_DIR}/thirdparty/eigen"
+     )
+ 
+ # First try to use the standard find_package that should be able to find the
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -52,7 +52,7 @@
+ #######################################################################
+ 
+ if (SKBUILD)
+-    add_subdirectory(thirdparty/pybind11)
++    find_package(pybind11 REQUIRED)
+     add_subdirectory(interface/python)
+     set(CMAKE_POSITION_INDEPENDENT_CODE ON)
+ endif()

sci-libs/Mutationpp/metadata.xml

@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+    <maintainer type="person">
+        <email>lssndrbarbieri@gmail.com</email>
+        <name>Alessandro Barbieri</name>
+    </maintainer>
+    <upstream>
+        <bugs-to>https://github.com/mutationpp/Mutationpp/issues</bugs-to>
+        <remote-id type="github">mutationpp/Mutationpp</remote-id>
+    </upstream>
+</pkgmetadata>