diff --git a/metadata/md5-cache/dev-db/tdscpp-20240629 b/metadata/md5-cache/dev-db/tdscpp-20240707 similarity index 95% rename from metadata/md5-cache/dev-db/tdscpp-20240629 rename to metadata/md5-cache/dev-db/tdscpp-20240707 index 5689058906..36a93edeeb 100644 --- a/metadata/md5-cache/dev-db/tdscpp-20240629 +++ b/metadata/md5-cache/dev-db/tdscpp-20240707 @@ -10,6 +10,6 @@ KEYWORDS=~amd64 ~arm ~arm64 ~riscv ~x86 LICENSE=LGPL-3 RDEPEND=dev-cpp/nlohmann_json dev-libs/icu kerberos? ( virtual/krb5 ) ssl? ( dev-libs/openssl ) SLOT=0 -SRC_URI=https://codeload.github.com/maharmstone/tdscpp/tar.gz/refs/tags/20240629 -> tdscpp-20240629.tar.gz +SRC_URI=https://codeload.github.com/maharmstone/tdscpp/tar.gz/refs/tags/20240707 -> tdscpp-20240707.tar.gz _eclasses_=toolchain-funcs e56c7649b804f051623c8bc1a1c44084 multilib c19072c3cd7ac5cb21de013f7e9832e0 flag-o-matic e503ea5acc20410237ba33ec3f7c857d multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 xdg-utils baea6080dd821f5562d715887954c9d3 cmake 258a4691fd43b8cd5814cb1acbb3c7df _md5_=92728350c53f23b1ff857a731d8aebfd diff --git a/metadata/md5-cache/sci-biology/cmdock-0.2.0 b/metadata/md5-cache/sci-biology/cmdock-0.2.0 deleted file mode 100644 index 6516b79fd2..0000000000 --- a/metadata/md5-cache/sci-biology/cmdock-0.2.0 +++ /dev/null @@ -1,16 +0,0 @@ -BDEPEND=apidoc? ( app-text/doxygen dev-texlive/texlive-fontutils ) doc? ( || ( ( dev-lang/python:3.12 dev-python/insipid-sphinx-theme[python_targets_python3_12(-)] dev-python/sphinx[python_targets_python3_12(-)] ) ( dev-lang/python:3.11 dev-python/insipid-sphinx-theme[python_targets_python3_11(-)] dev-python/sphinx[python_targets_python3_11(-)] ) ( dev-lang/python:3.10 dev-python/insipid-sphinx-theme[python_targets_python3_10(-)] dev-python/sphinx[python_targets_python3_10(-)] ) ) ) test? ( || ( dev-lang/python:3.12 dev-lang/python:3.11 dev-lang/python:3.10 ) ) >=dev-build/meson-1.2.3 app-alternatives/ninja dev-build/meson-format-array -DEFINED_PHASES=compile configure install postinst postrm prepare setup test -DEPEND=dev-cpp/eigen:3 dev-cpp/indicators >=dev-cpp/pcg-cpp-0.98.1_p20210406-r1 dev-libs/cxxopts -DESCRIPTION=Program for docking ligands to proteins and nucleic acids -EAPI=8 -HOMEPAGE=https://gitlab.com/Jukic/cmdock -INHERIT=boinc-app flag-o-matic meson optfeature python-any-r1 -IUSE=apidoc boinc cpu_flags_x86_sse2 doc test -KEYWORDS=~amd64 -LICENSE=LGPL-3 ZLIB -RDEPEND=boinc? ( sci-misc/boinc-wrapper ) -RESTRICT=!test? ( test ) -SLOT=0/0.2.0 -SRC_URI=https://gitlab.com/Jukic/cmdock/-/archive/v0.2.0/cmdock-v0.2.0.tar.bz2 -_eclasses_=boinc-app f9160f6b789f681ddcc7ecf54928ae47 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 multilib c19072c3cd7ac5cb21de013f7e9832e0 flag-o-matic e503ea5acc20410237ba33ec3f7c857d multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 python-utils-r1 8b220bbce5c119fb1d4d5c2f5588f3ea meson 99466844dd8d4fcfb07578a76f5a9922 optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 python-any-r1 f5169813d1619761b459800587005fd2 -_md5_=ae3ff3281cbbd6c2f2a264f909f44671 diff --git a/metadata/md5-cache/sci-biology/cmdock-0.2.0-r1 b/metadata/md5-cache/sci-biology/cmdock-0.2.0-r2 similarity index 83% rename from metadata/md5-cache/sci-biology/cmdock-0.2.0-r1 rename to metadata/md5-cache/sci-biology/cmdock-0.2.0-r2 index 52abaf11d3..b9892fea76 100644 --- a/metadata/md5-cache/sci-biology/cmdock-0.2.0-r1 +++ b/metadata/md5-cache/sci-biology/cmdock-0.2.0-r2 @@ -1,16 +1,16 @@ BDEPEND=apidoc? ( app-text/doxygen dev-texlive/texlive-fontutils ) doc? ( || ( ( dev-lang/python:3.12 dev-python/insipid-sphinx-theme[python_targets_python3_12(-)] dev-python/sphinx[python_targets_python3_12(-)] ) ( dev-lang/python:3.11 dev-python/insipid-sphinx-theme[python_targets_python3_11(-)] dev-python/sphinx[python_targets_python3_11(-)] ) ( dev-lang/python:3.10 dev-python/insipid-sphinx-theme[python_targets_python3_10(-)] dev-python/sphinx[python_targets_python3_10(-)] ) ) ) test? ( || ( dev-lang/python:3.12 dev-lang/python:3.11 dev-lang/python:3.10 ) ) >=dev-build/meson-1.2.3 app-alternatives/ninja dev-build/meson-format-array DEFINED_PHASES=compile configure install postinst postrm prepare setup test -DEPEND=dev-cpp/eigen:3 >=dev-cpp/indicators-2.3-r1 >=dev-cpp/pcg-cpp-0.98.1_p20210406-r1 >=dev-libs/cxxopts-3 +DEPEND=dev-cpp/eigen:3 >=dev-cpp/indicators-2.3-r1 >=dev-cpp/pcg-cpp-0.98.1_p20210406-r1 >=dev-libs/cxxopts-3 boinc? ( sci-misc/boinc acct-user/boinc ) DESCRIPTION=Program for docking ligands to proteins and nucleic acids EAPI=8 HOMEPAGE=https://gitlab.com/Jukic/cmdock INHERIT=boinc-app flag-o-matic meson optfeature python-any-r1 -IUSE=apidoc boinc cpu_flags_x86_sse2 doc test +IUSE=apidoc cpu_flags_x86_sse2 doc test boinc KEYWORDS=~amd64 LICENSE=LGPL-3 ZLIB -RDEPEND=boinc? ( sci-misc/boinc-wrapper ) +RDEPEND=boinc? ( sci-misc/boinc acct-user/boinc ) RESTRICT=test SLOT=0/0.2.0 SRC_URI=https://gitlab.com/Jukic/cmdock/-/archive/v0.2.0/cmdock-v0.2.0.tar.bz2 -_eclasses_=boinc-app f9160f6b789f681ddcc7ecf54928ae47 toolchain-funcs e56c7649b804f051623c8bc1a1c44084 multilib c19072c3cd7ac5cb21de013f7e9832e0 flag-o-matic e503ea5acc20410237ba33ec3f7c857d multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 python-utils-r1 8b220bbce5c119fb1d4d5c2f5588f3ea meson 99466844dd8d4fcfb07578a76f5a9922 optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 python-any-r1 f5169813d1619761b459800587005fd2 -_md5_=29bdb70a3d2e3587f49abe75443e725e +_eclasses_=boinc-app 0d7f72b88d91948c19dbbf7a8ca3833a toolchain-funcs e56c7649b804f051623c8bc1a1c44084 multilib c19072c3cd7ac5cb21de013f7e9832e0 flag-o-matic e503ea5acc20410237ba33ec3f7c857d multiprocessing 30ead54fa2e2b5f9cd4e612ffc34d0fe ninja-utils 2df4e452cea39a9ec8fb543ce059f8d6 python-utils-r1 8b220bbce5c119fb1d4d5c2f5588f3ea meson 99466844dd8d4fcfb07578a76f5a9922 optfeature 222cb475c5a4f7ae7cfb0bf510a6fe54 python-any-r1 f5169813d1619761b459800587005fd2 +_md5_=f4f3a2d51f39edc518cf1b8ffd81f46e diff --git a/metadata/md5-cache/sci-biology/geneathome-1.10-r5 b/metadata/md5-cache/sci-biology/geneathome-1.10-r5 index 08e389560e..0891c55137 100644 --- a/metadata/md5-cache/sci-biology/geneathome-1.10-r5 +++ b/metadata/md5-cache/sci-biology/geneathome-1.10-r5 @@ -1,13 +1,13 @@ DEFINED_PHASES=compile install postinst postrm test -DEPEND=sci-misc/boinc acct-user/boinc +DEPEND=app-arch/bzip2 sci-misc/boinc acct-user/boinc DESCRIPTION=BOINC application for expanding Gene Regulatory Networks (GRN) EAPI=8 HOMEPAGE=https://gene.disi.unitn.it/test/ https://bitbucket.org/francesco-asnicar/pc-boinc INHERIT=boinc-app edo toolchain-funcs KEYWORDS=~amd64 ~arm64 ~x86 LICENSE=sunpro public-domain -RDEPEND=sci-misc/boinc acct-user/boinc +RDEPEND=app-arch/bzip2 sci-misc/boinc acct-user/boinc SLOT=0 SRC_URI=https://bitbucket.org/francesco-asnicar/pc-boinc/get/3186afba409a.tar.gz -> geneathome-1.10.tar.gz -_eclasses_=boinc-app f9160f6b789f681ddcc7ecf54928ae47 edo 367e103a74bf77e6a8da7894d999fa3c toolchain-funcs e56c7649b804f051623c8bc1a1c44084 multilib c19072c3cd7ac5cb21de013f7e9832e0 +_eclasses_=boinc-app 0d7f72b88d91948c19dbbf7a8ca3833a edo 367e103a74bf77e6a8da7894d999fa3c toolchain-funcs e56c7649b804f051623c8bc1a1c44084 multilib c19072c3cd7ac5cb21de013f7e9832e0 _md5_=2d26e0440f9266f0991bf6c61450d8f7 diff --git a/metadata/md5-cache/sec-keys/openpgp-keys-emersion-20230421 b/metadata/md5-cache/sec-keys/openpgp-keys-emersion-20240714 similarity index 74% rename from metadata/md5-cache/sec-keys/openpgp-keys-emersion-20230421 rename to metadata/md5-cache/sec-keys/openpgp-keys-emersion-20240714 index 62069125f1..a547e71a93 100644 --- a/metadata/md5-cache/sec-keys/openpgp-keys-emersion-20230421 +++ b/metadata/md5-cache/sec-keys/openpgp-keys-emersion-20240714 @@ -5,5 +5,5 @@ HOMEPAGE=https://emersion.fr/about KEYWORDS=~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~m68k ~mips ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 LICENSE=public-domain SLOT=0 -SRC_URI=https://emersion.fr/.well-known/openpgpkey/hu/dj3498u4hyyarh35rkjfnghbjxug6b19 -> openpgp-keys-emersion-20230421.asc -_md5_=c288ae94a906ca1c668f84dc4adfc5e5 +SRC_URI=https://emersion.fr/.well-known/openpgpkey/hu/dj3498u4hyyarh35rkjfnghbjxug6b19 -> openpgp-keys-emersion-20240714.asc +_md5_=6b23fa95df927e779e1b33b1ea2467d1 diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index index 4832ef0b8d..d7039cfb5c 100644 --- a/metadata/pkg_desc_index +++ b/metadata/pkg_desc_index @@ -453,7 +453,7 @@ dev-db/pg_repack 1.5.0: Reorganize tables in PostgreSQL databases with minimal l dev-db/psequel 0.1.8-r1: Run your SQL query dev-db/rum 1.3.13: RUM access method - inverted index with additional information in posting lists dev-db/sqlcmd 1.7.0: The MSSQL SQLCMD CLI tool -dev-db/tdscpp 20240629: C++ library to communicate with Microsoft SQL server +dev-db/tdscpp 20240707: C++ library to communicate with Microsoft SQL server dev-debug/gdb-dashboard 0.17.2: Modular visual interface for GDB in Python dev-debug/lldb-mi 0.0.1 9999: LLDB Machine Interface Driver dev-dotnet/gtk-sharp 2.99.3-r3 3.22.2-r2: gtk bindings for mono @@ -1483,7 +1483,7 @@ phosh-base/phosh-osk-stub 0.36.0 0.38.0: On-screen keyboard stub phosh-base/phosh-shell 0.36.0 0.38.0 0.40.0: Pure Wayland shell for mobile devices phosh-base/phosh-tour 0.36.0 0.38.0 0.39.0: Introduction to phosh on smartphones phosh-base/squeekboard 1.17.1: Virtual keyboard supporting Wayland, built primarily for the Librem 5 phone -sci-biology/cmdock 0.2.0 0.2.0-r1: Program for docking ligands to proteins and nucleic acids +sci-biology/cmdock 0.2.0-r2: Program for docking ligands to proteins and nucleic acids sci-biology/cytoscape-bin 3.10.2: A visualization platform for molecular interaction networks sci-biology/geneathome 1.10-r5: BOINC application for expanding Gene Regulatory Networks (GRN) sci-biology/jalview-bin 2.11.3.3: Editor of multiple sequence alignments. @@ -1537,7 +1537,7 @@ sci-mathematics/rstudio-desktop-bin 2023.09.0_p463 2023.09.1_p494: IDE for R and sci-misc/boinc-wrapper 26018-r1: Wrapper to use non-BOINC apps with BOINC sci-physics/ovito 3.10.4 3.10.5: Open Visualization Tool sec-keys/openpgp-keys-aepaneshnikov 20221210: OpenPGP keys used by Alexander Epaneshnikov -sec-keys/openpgp-keys-emersion 20230421: OpenPGP keys used by Simon Ser +sec-keys/openpgp-keys-emersion 20240714: OpenPGP keys used by Simon Ser sec-keys/openpgp-keys-jvoisin 20230224: OpenPGP keys used by Julien Voisin sec-keys/openpgp-keys-phosh 2024: OpenPGP keys used to sign Phosh releases sec-keys/openpgp-keys-russallbery 20230000: OpenPGP keys used by Russ Allbery (Eagle) diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk index 4963b9416d..2812be4f7c 100644 --- a/metadata/timestamp.chk +++ b/metadata/timestamp.chk @@ -1 +1 @@ -Sun, 14 Jul 2024 00:48:43 +0000 +Sun, 14 Jul 2024 15:33:52 +0000